Kinetochore life histories reveal an Aurora-B-dependent error correction mechanism in anaphase

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An Efficient Regression Type Estimator in Survey Sampling

For the estimation of population mean in simple random sampling, an efficient regression-type estimator is proposed which is more efficient than the conventional regression estimator and hence than mean per unit estimator, ratio and product estimators and many other estimators proposed by various authors. Some numerical examples are included for illustration.     

On blocking rules for the bootstrap with dependent data

We address the issue of optimal block choice in applicationsof the block bootstrap to dependent data. It is shown that optimalblock size depends significantly on context, being equal ton^1/3, n^1/4 and n^1/5 in the cases of variance or bias estimation,estimation of a onesided distribution function, and estimationof a two-sided distribution function, respectively. A clearintuitive explanation of this phenomenon is given, togetherwith outlines of theoretical arguments in specific cases. Itis shown that these orders of magnitude of block sizes can beused to produce a simple, practical rule for selecting blocksize empirically. That technique is explored numerically.     

Can We Accurately Characterize Wildlife Resource Use When Telemetry Data Are Imprecise?

ABSTRACT Telemetry data have been widely used to quantify wildlife habitat relationships despite the fact that these data are inherently imprecise. All telemetry data have positional error, and failure to account for that error can lead to incorrect predictions of wildlife resource use. Several techniques have been used to account for positional error in wildlife studies. These techniques have been described in the literature, but their ability to accurately characterize wildlife resource use has never been tested. We evaluated the performance of techniques commonly used for incorporating telemetry error into studies of wildlife resource use. Our evaluation was based on imprecise telemetry data (mean telemetry error = 174 m, SD = 130 m) typical of field-based studies. We tested 5 techniques in 10 virtual environments and in one real-world environment for categorical (i.e., habitat types) and continuous (i.e., distances or elevations) rasters. Technique accuracy varied by patch size for the categorical rasters, with higher accuracy as patch size increased. At the smallest patch size (1 ha), the technique that ignores error performed best on categorical data (0.31 and 0.30 accuracy for virtual and real data, respectively); however, as patch size increased the bivariate-weighted technique performed better (0.56 accuracy at patch sizes >31 ha) and achieved complete accuracy (i.e., 1.00 accuracy) at smaller patch sizes (472 ha and 1,522 ha for virtual and real data, respectively) than any other technique. We quantified the accuracy of the continuous covariates using the mean absolute difference (MAD) in covariate value between true and estimated locations. We found that average MAD varied between 104 m (ignore telemetry error) and 140 m (rescale the covariate data) for our continuous covariate surfaces across virtual and real data sets. Techniques that rescale continuous covariate data or use a zonal mean on values within a telemetry error polygon were significantly less accurate than other techniques. Although the technique that ignored telemetry error performed best on categorical rasters with smaller average patch sizes (i.e., ≤31 ha) and on continuous rasters in our study, accuracy was so low that the utility of using point-based approaches for quantifying resource use is questionable when telemetry data are imprecise, particularly for small-patch habitat relationships.     

Estimation of uncertainties in X-ray refinement results by use of perturbed structures

The uncertainties in the refined parameters for a 1.5-A X-ray structure of carbon-monoxy (FeII) myoglobin are estimated by combining energy minimization with least-squares refinement against the X-ray data. The energy minimizations, done without reference to the X-ray data, provide perturbed structures which are used to restart conventional X-ray refinement. The resulting refined structures have the same, or better, R-factor and stereochemical parameters as the original X-ray structure, but deviate from it by 0.13 A rms for the backbone atoms and 0.31 A rms for the sidechain atoms. Atoms interacting with a disordered sidechain, Arg 45 CD3, are observed to have larger positional uncertainties. The uncertainty in the B-factors, within the isotropic harmonic motion approximation, is estimated to be 15%. The resulting X-ray structures are more consistent with the energy parameters used in simulations.     

Temperature as a determinative factor in the evolution of genetic systems

Summary Heat induces a number of premutational lesions (for example, the deamination of cytosine to uracil) in DNA and RNA. These kinds of errors occur in resting as well as replicating polynucleotides. However, an increase in temperature also raises the probability of copying error occurring in nucleic acids because of increased thermal noise in the replicative machinery. In most modern genetic systems, the majority of heat-induced lesions are efficiently repaired. It follows that the importance of heat-induced error increases as the effectiveness of repair declines. We show in this paper that the error rate of enzymatic polynucleotide copying is expected to increase monotonically with temperature. We also explore the effects of temperature variations on the early evolution of biological information transmission mechanisms.     

The orientation behaviour of the lesser spearnosed bat, Phyllostomus discolor (Chiroptera) in a model roost

The orientation behaviour of bats (Phyllostomus discolor, Phyllostomidae), flying inside an octagonal roost-like chamber (ø: 100cm; h: 150cm) was examined.It has been shown that the bats begin turning manoeuvres during flight by turning their head towards the direction they intend to proceed to. During early phases of the flights, cumulative navigation errors were evident, indicating that endogenous spatial information plays a major role in the orientation of the bats. During later phases of the flight this error is diminished again. So it can be concluded that the bats start to use exogenous spatial information for orientation while approaching the target.In order to investigate the relative importance of vision, echolocation and endogenous spatial information for approaching the roost, the landing lattices inside the test arena were changed for non-grid dummies. We found that: 1. combined visual and endogenous information are more important than echoacoustical cues, 2. the bats learned quickly to switch their orientation behaviour in order to get a better performance in avoiding the dummies, 3. the learning performance was influenced by the visual similarity of dummies and the real landing lattice.     

Rank and sequence in Caspar Bauhin's Pinax

CAIN, A. J., 1994. Rank and sequence in Caspar Bauhin's Pinax. Bauhin's consistent use of genera, species and binominals, applauded by historians as anticipating Linnaeus's theory and practice, does not appear on closer examination to be intended as anything of the sort. His use of the terms genus and species is as in Aristotelian logic, with a shifting reference, at all taxonomic levels. His typographical layout, emphasizing (but far from invariably employing) single-word names for effectively generic entities, often qualified by ‘and its species’, gives the impression of Linnaean practice, and coincides with it not infrequently, but not with Linnaean theory. The main entities for which it can be said that Bauhin uses fairly consistently a biverbal binominal name-phrase, like Linnaeus' trivial names, were in fact in Linnaeus's eyes two levels of supraspecific groupings. The main entities in Bauhin which Linnaeus recognized as species, as is shown by his quotations in the Species plantarum, are subdivisions of his biverbally or nearly biverbally named groupings, but themselves have multiverbal names. These correspond closely to Linnaeus's diagnostic specific names, not at all to his biverbal trivial names. Bauhin probably had no conception of the species and genus as ranks in the modern sense, first adumbrated by Tournefort and utilized by Linnaeus. Bauhin certainly tried to group forms by natural affinity, as did Theophrastus before him and Linnaeus afterwards. Not being alerted to the importance of the details of the flower and fruit, he used what characters he could find, notably, but not by any means exclusively, leaf shape. He composed the Pinax as a nomenclatural concordance to earlier authors, notably Dioscorides, Theophrastus and Pliny. He retained the sequence of major groups of Theophrastus (as the greatest authority on plants) but reversed it to start with the best-known plants, grasses. Where Theophrastus gave no help, in the cryptogams, Bauhin inserted as a pendant his own series from ferns down to fungi, using the Aristotelian principles of the gradation of forms. His overall arrangement, therefore, is not a simple progression but a chain with pendants. Bauhin is far closer to earlier authors than to Linnaeus, but his typography, along with other authors, may well have helped to incite Linnaeus to a more rigorous and consistent use of ranked groups and biverbal names.